Figure 2 Paths for raw data storage and scripts used for image analysis 1. Oksanen protocol 1.1 Raw data Images stored: S:\YokogawaCV8000Standalone\CellPathfinder\Patrycja MULICA /mnt/AtlasHCS/YokogawaCV8000Standalone/CellPathfinder/Patrycja/PKM_20210927_gfap_astro_OksanenMorph_20210927_205648/AssayPlate_PerkinElmer_CellCarrierUltra96 /mnt/AtlasHCS/YokogawaCV8000Standalone/CellPathfinder/Patrycja/PKM_20210927_gfap_astro2_OksanenMorph2_20210927_222659/AssayPlate_PerkinElmer_CellCarrierUltra96 1.2 Analysed data /mnt/AtlasHCS/HCS_Platform/Data/PatrycjaMulica/AstroComparison/PKM_20210927_gfap_astro_OksanenMorph_20210927_205648_out_20211207 /mnt/AtlasHCS/HCS_Platform/Data/PatrycjaMulica/AstroComparison/PKM_20210927_gfap_astro2_OksanenMorph2_20210927_222659_out_20211207 2. Palm protocol 1.1 Raw data Images stored: S:\YokogawaCV8000Standalone\CellPathfinder\Patrycja MULICA Folder: /mnt/AtlasHCS/YokogawaCV8000Standalone/CellPathfinder/Patrycja/PKM_20210927_gfap_astro_PalmMorph_20211028_152159/AssayPlate_PerkinElmer_CellCarrierUltra96 1.2 Analysed data /mnt/AtlasHCS/HCS_Platform/Data/PatrycjaMulica/AstroComparison/PKM_20210927_gfap_astro_PalmMorph_20211028_152159_205648_out_20211207