Excluded sections from the analysis: AZ_20221220_S100b488_SOX2568_MAP2647_celltypesd30d60_20221220_145833 OR11 A04 WT_56_Ctrl_R2_D60 OR19 A04 WT_68_LI_R1_D60 OR21 A03 WT_23338_LI_R2_D30 AZ_20211124_celltypes2_20230210_153116 - none excluded AZ_20230522_S100b488_SOX2568_MAP2647_celltypes3_20230521_183416 OR4 A02 WT_23_LI_D60 OR16 A02 WT_23_LI_D60 OR2 A02 WT_56_Ctrl_D30 OR9 A02 WT_56_Ctrl_D30 OR4 A04 WT_56_Ctrl_R3_D30 OR15 A02 WT_56_LI_D60 OR21 A04 WT_56_LI_R1_D30 OR10 A03 WT_56_LI_R2_D60 OR17 A03 WT_68_LI_R1_D60 OR18 A02 WT_23338_Ctrl_D30 OR19 A03 WT_23338_LI_R1_D60 Reasons: section out of focus very low staining quality mask is not optimal